WormBase Tree Display for Variation: WBVar00173179
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WBVar00173179 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00173179 | |||
Other_name | pas37371 | ||||
haw26429 | |||||
cewivar00091525 | |||||
E04F6.10.2:c.150+138T>C | |||||
E04F6.10.1:c.150+138T>C | |||||
HGVSg | CHROMOSOME_II:g.7216623A>G | ||||
Sequence_details | SMap | S_parent | Sequence | E04F6 | |
Flanking_sequences | actctagattttgaaaattgttaca | aggagtttgtattcttaatagaagg | |||
Mapping_target | E04F6 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (37) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson6900 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
WGS_Pasadena_Quinlan | |||||
History | Acquires_merge | WBVar01307577 | |||
WBVar00225595 | |||||
WBVar01373229 | |||||
WBVar01241190 | |||||
Status | Live | ||||
Affects | Gene | WBGene00017129 | |||
Transcript | E04F6.10.2 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | E04F6.10.2:c.150+138T>C | ||||
Intron_number | 3/5 | ||||
E04F6.10.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | E04F6.10.1:c.150+138T>C | ||||
Intron_number | 4/6 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw26429 | ||||
Method | WGS_Hawaiian_Waterston |