WormBase Tree Display for Variation: WBVar00172518
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WBVar00172518 | Name | Public_name | WBVar00172518 | ||
---|---|---|---|---|---|
Other_name | pas36736 | ||||
haw25768 | |||||
haw130974 | |||||
cewivar00090770 | |||||
F57F10.1b.1:c.68-4110T>C | |||||
F57F10.1c.1:c.347-4110T>C | |||||
F57F10.1b.2:c.68-4110T>C | |||||
F57F10.1d.1:c.311-4110T>C | |||||
HGVSg | CHROMOSOME_II:g.6147037T>C | ||||
Sequence_details | SMap | S_parent | Sequence | F57F10 | |
Flanking_sequences | agagtgattcacatcccaatttgaa | aatctctttattctgatttattata | |||
Mapping_target | F57F10 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (38) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson6900 | |||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WGS_Pasadena_Quinlan | |||||
History | Acquires_merge | WBVar01240381 | |||
WBVar00224960 | |||||
WBVar01372386 | |||||
WBVar00550839 | |||||
WBVar01306766 | |||||
Status | Live | ||||
Affects | Gene | WBGene00019018 | |||
Transcript | F57F10.1d.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F57F10.1d.1:c.311-4110T>C | ||||
Intron_number | 3/17 | ||||
F57F10.1c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F57F10.1c.1:c.347-4110T>C | ||||
Intron_number | 3/17 | ||||
F57F10.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F57F10.1b.1:c.68-4110T>C | ||||
Intron_number | 3/18 | ||||
F57F10.1b.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F57F10.1b.2:c.68-4110T>C | ||||
Intron_number | 2/17 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw25768 | ||||
Method | WGS_Hawaiian_Waterston |