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WormBase Tree Display for Variation: WBVar00172518

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Name Class

WBVar00172518NamePublic_nameWBVar00172518
Other_namepas36736
haw25768
haw130974
cewivar00090770
F57F10.1b.1:c.68-4110T>C
F57F10.1c.1:c.347-4110T>C
F57F10.1b.2:c.68-4110T>C
F57F10.1d.1:c.311-4110T>C
HGVSgCHROMOSOME_II:g.6147037T>C
Sequence_detailsSMapS_parentSequenceF57F10
Flanking_sequencesagagtgattcacatcccaatttgaaaatctctttattctgatttattata
Mapping_targetF57F10
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (38)
LaboratoryRW
AX
PersonWBPerson1562
WBPerson6900
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
WGS_Pasadena_Quinlan
HistoryAcquires_mergeWBVar01240381
WBVar00224960
WBVar01372386
WBVar00550839
WBVar01306766
StatusLive
AffectsGeneWBGene00019018
TranscriptF57F10.1d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF57F10.1d.1:c.311-4110T>C
Intron_number3/17
F57F10.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF57F10.1c.1:c.347-4110T>C
Intron_number3/17
F57F10.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF57F10.1b.1:c.68-4110T>C
Intron_number3/18
F57F10.1b.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF57F10.1b.2:c.68-4110T>C
Intron_number2/17
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw25768
MethodWGS_Hawaiian_Waterston