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WormBase Tree Display for Variation: WBVar00171608

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Name Class

WBVar00171608EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00171608
Other_namepas34685
haw24858
cewivar00013282
CE41918:p.Glu100=
M03A1.8.1:c.300G>A
HGVSgCHROMOSOME_II:g.4560863G>A
Sequence_detailsSMapS_parentSequenceM03A1
Flanking_sequencesaatctgaaaatttaacgtcgtgtgaattgatttttatccgggggatgttc
Mapping_targetM03A1
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (39)
LaboratoryRW
AX
PersonWBPerson1562
WBPerson6900
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
WGS_Pasadena_Quinlan
HistoryAcquires_mergeWBVar01371199
WBVar01239327
WBVar01305808
WBVar00222909
StatusLive
AffectsGeneWBGene00077490
TranscriptM03A1.8.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScM03A1.8.1:c.300G>A
HGVSpCE41918:p.Glu100=
cDNA_position371
CDS_position300
Protein_position100
Exon_number3/8
Codon_changegaG/gaA
Amino_acid_changeE
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw24858
MethodWGS_Hawaiian_Waterston