WormBase Tree Display for Variation: WBVar00171434
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WBVar00171434 | Name | Public_name | WBVar00171434 | ||
---|---|---|---|---|---|
Other_name | haw24684 | ||||
haw130272 | |||||
cewivar00184230 | |||||
T12C9.7a.1:c.*111A>G | |||||
T12C9.7b.1:c.*111A>G | |||||
HGVSg | CHROMOSOME_II:g.4458318T>C | ||||
Sequence_details | SMap | S_parent | Sequence | T12C9 | |
Flanking_sequences | agagaagacggggaacgtgcaattt | aaaggggtaaaatatgagaaaccga | |||
Mapping_target | T12C9 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00022850 | From_analysis | WGS_De_Bono | |||
Million_mutation_project_reanalysis | |||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00550137 | |||
WBVar01370985 | |||||
WBVar01305597 | |||||
Status | Live | ||||
Affects | Gene | WBGene00020461 | |||
Transcript | T12C9.7a.1 | VEP_consequence | 3_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | T12C9.7a.1:c.*111A>G | ||||
cDNA_position | 1914 | ||||
Exon_number | 11/11 | ||||
T12C9.7b.1 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T12C9.7b.1:c.*111A>G | ||||
cDNA_position | 1364 | ||||
Exon_number | 11/11 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw24684 | ||||
Method | WGS_Hawaiian_Waterston |