WormBase Tree Display for Variation: WBVar00170448
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WBVar00170448 | Name | Public_name | WBVar00170448 | ||
---|---|---|---|---|---|
Other_name | pas33171 | ||||
uCE2-1505 | |||||
haw23698 | |||||
haw129484 | |||||
cewivar00012041 | |||||
F53C3.7.1:c.*135A>T | |||||
HGVSg | CHROMOSOME_II:g.3896528A>T | ||||
Sequence_details | SMap | S_parent | Sequence | F53C3 | |
Flanking_sequences | ccgatcgattctgtaatttttctaa | ttttttcccaatcctccgtcttccg | |||
Mapping_target | F53C3 | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (18) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson6900 | |||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
SNP_Swan | |||||
WGS_Pasadena_Quinlan | |||||
History | Acquires_merge | WBVar00221395 | |||
WBVar01369525 | |||||
WBVar00268602 | |||||
WBVar00549349 | |||||
WBVar01304369 | |||||
WBVar01238063 | |||||
Status | Live | ||||
Affects | Gene | WBGene00018751 | |||
Transcript | F53C3.7.1 | VEP_consequence | 3_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F53C3.7.1:c.*135A>T | ||||
cDNA_position | 935 | ||||
Exon_number | 10/10 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
WBPaper00005369 | |||||
Remark | [20081124 db] this Variation was previously named hw23698 | ||||
Method | WGS_Hawaiian_Waterston |