WormBase Tree Display for Variation: WBVar00170282
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| WBVar00170282 | Name | Public_name | WBVar00170282 | ||
|---|---|---|---|---|---|
| Other_name | pas33049 | ||||
| haw23532 | |||||
| haw129375 | |||||
| cewivar00089099 | |||||
| C17A2.4.1:c.375G>A | |||||
| CE08242:p.Leu125= | |||||
| HGVSg | CHROMOSOME_II:g.3840363G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | C17A2 | |
| Flanking_sequences | tggaaaaaatcgatgagaagtatct | cacttaacaggaatgttttatcagg | |||
| Mapping_target | C17A2 | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (15) | |||||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson6900 | |||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Pasadena_Quinlan | |||||
| History | Acquires_merge | WBVar00221273 | |||
| WBVar00549240 | |||||
| WBVar01369290 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00015872 | |||
| Transcript | C17A2.4.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | C17A2.4.1:c.375G>A | ||||
| HGVSp | CE08242:p.Leu125= | ||||
| cDNA_position | 375 | ||||
| CDS_position | 375 | ||||
| Protein_position | 125 | ||||
| Exon_number | 2/5 | ||||
| Codon_change | ctG/ctA | ||||
| Amino_acid_change | L | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Remark | [20081124 db] this Variation was previously named hw23532 | ||||
| Method | WGS_Hawaiian_Waterston |
