WormBase Tree Display for Variation: WBVar00170087
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WBVar00170087 | Name | Public_name | WBVar00170087 | ||
---|---|---|---|---|---|
Other_name | haw23337 | ||||
haw129210 | |||||
cewivar00011738 | |||||
CE47076:p.Lys330= | |||||
T24E12.6c.1:c.972G>A | |||||
T24E12.6b.1:c.990G>A | |||||
CE54529:p.Lys324= | |||||
HGVSg | CHROMOSOME_II:g.3760307C>T | ||||
Sequence_details | SMap | S_parent | Sequence | T24E12 | |
Flanking_sequences | aacaactgaaagaaaatcactaatt | ttcttcagtggttcttctcgatttg | |||
Mapping_target | T24E12 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (21) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01369002 | |||
WBVar01237761 | |||||
WBVar01304052 | |||||
WBVar00549075 | |||||
Status | Live | ||||
Affects | Gene | WBGene00020775 | |||
Transcript | T24E12.6c.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | T24E12.6c.1:c.972G>A | ||||
HGVSp | CE54529:p.Lys324= | ||||
cDNA_position | 972 | ||||
CDS_position | 972 | ||||
Protein_position | 324 | ||||
Exon_number | 9/9 | ||||
Codon_change | aaG/aaA | ||||
Amino_acid_change | K | ||||
T24E12.6b.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | T24E12.6b.1:c.990G>A | ||||
HGVSp | CE47076:p.Lys330= | ||||
cDNA_position | 990 | ||||
CDS_position | 990 | ||||
Protein_position | 330 | ||||
Exon_number | 9/9 | ||||
Codon_change | aaG/aaA | ||||
Amino_acid_change | K | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw23337 | ||||
Method | WGS_Hawaiian_Waterston |