WormBase Tree Display for Variation: WBVar00169371
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WBVar00169371 | Name | Public_name | WBVar00169371 | ||
---|---|---|---|---|---|
Other_name | uCE2-1336 | ||||
haw22621 | |||||
cewivar00010098 | |||||
C16C8.13.1:c.-9+797T>C | |||||
CE44894:p.Val100Ala | |||||
C16C8.20.1:c.299T>C | |||||
C16C8.13.2:c.-9+797T>C | |||||
HGVSg | CHROMOSOME_II:g.3447834T>C | ||||
Sequence_details | SMap | S_parent | Sequence | C16C8 | |
Flanking_sequences | atcaaactgcgcatcaattcacttg | aggaatagacatcggctcgttcagc | |||
Mapping_target | C16C8 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (38) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
SNP_Swan | |||||
History | Acquires_merge | WBVar00268460 | |||
WBVar01302740 | |||||
WBVar01236576 | |||||
WBVar01367820 | |||||
Status | Live | ||||
Affects | Gene | WBGene00015851 | |||
WBGene00195070 | |||||
WBGene00305274 | |||||
WBGene00305273 | |||||
Transcript | C16C8.29 | ||||
C16C8.13.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C16C8.13.2:c.-9+797T>C | ||||
Intron_number | 1/5 | ||||
C16C8.28 | |||||
C16C8.20.1 (12) | |||||
C16C8.13.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C16C8.13.1:c.-9+797T>C | ||||
Intron_number | 1/5 | ||||
Reference | WBPaper00037807 | ||||
WBPaper00005369 | |||||
Remark | [20081124 db] this Variation was previously named hw22621 | ||||
Method | WGS_Hawaiian_Waterston |