WormBase Tree Display for Variation: WBVar00168817
expand all nodes | collapse all nodes | view schema
WBVar00168817 | Name | Public_name | WBVar00168817 | ||
---|---|---|---|---|---|
Other_name | haw22067 | ||||
haw128166 | |||||
cewivar00008520 | |||||
ZC239.15.1:c.-79T>A | |||||
HGVSg | CHROMOSOME_II:g.3224722A>T | ||||
Sequence_details | SMap | S_parent | Sequence | ZC239 | |
Flanking_sequences | atcagttataagattatcgatcagt | catatttcaaaatgattttttttaa | |||
Mapping_target | ZC239 | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (23) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01366828 | |||
WBVar01301614 | |||||
WBVar01235589 | |||||
WBVar00548031 | |||||
Status | Live | ||||
Affects | Gene | WBGene00022573 | |||
Transcript | ZC239.15.1 | VEP_consequence | 5_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | ZC239.15.1:c.-79T>A | ||||
cDNA_position | 10 | ||||
Exon_number | 1/6 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw22067 | ||||
Method | WGS_Hawaiian_Waterston |