WormBase Tree Display for Variation: WBVar00168562
expand all nodes | collapse all nodes | view schema
WBVar00168562 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00168562 | |||
Other_name | pas33363 | ||||
haw21812 | |||||
cewivar00007725 | |||||
Y25C1A.12.1:c.778-41A>T | |||||
HGVSg | CHROMOSOME_II:g.3098614T>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y25C1A | |
Flanking_sequences | acttaggattatttatttgaagaat | gttcctaggcctattggactaaagt | |||
Mapping_target | Y25C1A | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (39) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson6900 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
WGS_Pasadena_Quinlan | |||||
History | Acquires_merge | WBVar01366274 | |||
WBVar01301019 | |||||
WBVar01235083 | |||||
WBVar00221587 | |||||
Status | Live | ||||
Affects | Gene | WBGene00005181 | |||
Transcript | Y25C1A.12.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y25C1A.12.1:c.778-41A>T | ||||
Intron_number | 4/4 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw21812 | ||||
Method | WGS_Hawaiian_Waterston |