WormBase Tree Display for Variation: WBVar00168539

WBVar00168539 Name: Public_name: WBVar00168539
    Other_name: haw21789
      haw127891
      cewivar00182634
      CE54263:p.Ter334LysextTer?
      Y25C1A.9b.1:c.1000T>A
    HGVSg: CHROMOSOME_II:g.3088029A>T
  Sequence_details: SMap: S_parent: Sequence: Y25C1A
    Flanking_sequences: aattttggcgggaaattcgagatct tgacggaacctgcacagcagagaca
    Mapping_target: Y25C1A
    Type_of_mutation: Substitution: A T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_De_Bono
          WGS_Hawaiian_Waterston
          WGS_Yanai
          Million_mutation_project_reanalysis
    Laboratory: RW
      AX
    Person: WBPerson1562
      WBPerson4037
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      WGS_Yanai
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar00547756
        WBVar01366236
    Status: Live
  Affects: Gene: WBGene00005178
    Transcript: Y25C1A.9b.1 VEP_consequence: stop_lost
        VEP_impact: HIGH
        HGVSc: Y25C1A.9b.1:c.1000T>A
        HGVSp: CE54263:p.Ter334LysextTer?
        cDNA_position: 1072
        CDS_position: 1000
        Protein_position: 334
        Exon_number: 7/8
        Codon_change: Tag/Aag
        Amino_acid_change: */K
  Reference: WBPaper00038208
    WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw21789
  Method: WGS_Hawaiian_Waterston