WormBase Tree Display for Variation: WBVar00168466

WBVar00168466 Name: Public_name: WBVar00168466
    Other_name: pas32545
      haw21716
      haw127847
      cewivar00182590
      Y25C1A.7b.1:c.466+863A>G
      Y25C1A.7a.1:c.436+863A>G
      Y25C1A.7c.1:c.436+863A>G
    HGVSg: CHROMOSOME_II:g.3067509T>C
  Sequence_details: SMap: S_parent: Sequence: Y25C1A
    Flanking_sequences: ttagtgcgaaaaatcgttttgatat gattttttcgcggatttttctgtga
    Mapping_target: Y25C1A
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_Hawaiian_Waterston
          WGS_Yanai
          Million_mutation_project_reanalysis
      WBStrain00004604 From_analysis: WGS_Pasadena_Quinlan
      WBStrain00006642 From_analysis: WGS_De_Bono
      WBStrain00022850 From_analysis: WGS_De_Bono
      WBStrain00023018 From_analysis: Million_mutation_project_reanalysis
    Laboratory: RW
      AX
    Person: WBPerson1562
      WBPerson6900
      WBPerson4037
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      WGS_Yanai
      Million_mutation_project_reanalysis
      WGS_Pasadena_Quinlan
    History: Acquires_merge: WBVar00547712
        WBVar01300890
        WBVar00220769
        WBVar01234952
    Status: Live
  Affects: Gene: WBGene00021294
    Transcript: Y25C1A.7b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y25C1A.7b.1:c.466+863A>G
        Intron_number: 5/8
      Y25C1A.7c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y25C1A.7c.1:c.436+863A>G
        Intron_number: 5/11
      Y25C1A.7a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y25C1A.7a.1:c.436+863A>G
        Intron_number: 5/8
  Reference: WBPaper00038208
    WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw21716
  Method: WGS_Hawaiian_Waterston