WormBase Tree Display for Variation: WBVar00168203
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WBVar00168203 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00168203 | |||
Other_name | haw21453 | ||||
Y110A2AR.3a.1:c.576+956A>T | |||||
Y110A2AR.3b.2:c.*436+956A>T | |||||
Y110A2AR.3b.1:c.*436+956A>T | |||||
HGVSg | CHROMOSOME_II:g.2916278T>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y110A2AR | |
Flanking_sequences | tgaaaaaatgtcaatttccagcgaa | aattgggaaatttcctcagatttta | |||
Mapping_target | Y110A2AR | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00006642 | From_analysis | WGS_De_Bono | |||
WBStrain00022850 | From_analysis | WGS_De_Bono | |||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
History | Acquires_merge | WBVar01300413 | |||
WBVar01234493 | |||||
WBVar01365664 | |||||
Status | Live | ||||
Affects | Gene | WBGene00022453 | |||
Transcript | Y110A2AR.3b.2 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y110A2AR.3b.2:c.*436+956A>T | ||||
Intron_number | 7/7 | ||||
Y110A2AR.3a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y110A2AR.3a.1:c.576+956A>T | ||||
Intron_number | 7/9 | ||||
Y110A2AR.3b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y110A2AR.3b.1:c.*436+956A>T | ||||
Intron_number | 7/8 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw21453 | ||||
Method | WGS_Hawaiian_Waterston |