WormBase Tree Display for Variation: WBVar00168194
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WBVar00168194 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00168194 | |||
Other_name | haw21444 | ||||
cewivar00007177 | |||||
Y110A2AR.3b.2:c.*437-26T>C | |||||
Y110A2AR.3b.1:c.*437-26T>C | |||||
Y110A2AR.3a.1:c.577-26T>C | |||||
HGVSg | CHROMOSOME_II:g.2915017A>G | ||||
Sequence_details | SMap | S_parent | Sequence | Y110A2AR | |
Flanking_sequences | ctgaaaattggggaaattttagtcg | aaatatacaaattttagaggaattt | |||
Mapping_target | Y110A2AR | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (18) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01234488 | |||
WBVar01365654 | |||||
WBVar01300408 | |||||
Status | Live | ||||
Affects | Gene | WBGene00022453 | |||
Transcript | Y110A2AR.3b.2 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y110A2AR.3b.2:c.*437-26T>C | ||||
Intron_number | 7/7 | ||||
Y110A2AR.3a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y110A2AR.3a.1:c.577-26T>C | ||||
Intron_number | 7/9 | ||||
Y110A2AR.3b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y110A2AR.3b.1:c.*437-26T>C | ||||
Intron_number | 7/8 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw21444 | ||||
Method | WGS_Hawaiian_Waterston |