WormBase Tree Display for Variation: WBVar00168171
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WBVar00168171 | Name | Public_name | WBVar00168171 | ||
---|---|---|---|---|---|
Other_name | haw21421 | ||||
Y110A2AR.2i.1:c.102+151T>A | |||||
Y110A2AR.2e.1:c.669+151T>A | |||||
Y110A2AR.2c.1:c.96+157T>A | |||||
Y110A2AR.2h.1:c.102+151T>A | |||||
Y110A2AR.2f.1:c.669+151T>A | |||||
Y110A2AR.2b.1:c.669+151T>A | |||||
Y110A2AR.2g.1:c.102+151T>A | |||||
Y110A2AR.2d.1:c.669+151T>A | |||||
HGVSg | CHROMOSOME_II:g.2905483A>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y110A2AM | |
Flanking_sequences | aatttgggtttttaatagtgtcctg | gatttttttagctcaaaatttcgcc | |||
Mapping_target | Y110A2AM | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Status | Live | ||||
Affects | Gene | WBGene00006710 | |||
Transcript | Y110A2AR.2e.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y110A2AR.2e.1:c.669+151T>A | ||||
Intron_number | 5/6 | ||||
Y110A2AR.2h.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y110A2AR.2h.1:c.102+151T>A | ||||
Intron_number | 1/1 | ||||
Y110A2AR.2f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y110A2AR.2f.1:c.669+151T>A | ||||
Intron_number | 5/7 | ||||
Y110A2AR.2c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y110A2AR.2c.1:c.96+157T>A | ||||
Intron_number | 1/2 | ||||
Y110A2AR.2i.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y110A2AR.2i.1:c.102+151T>A | ||||
Intron_number | 2/4 | ||||
Y110A2AR.2d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y110A2AR.2d.1:c.669+151T>A | ||||
Intron_number | 5/8 | ||||
Y110A2AR.2b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y110A2AR.2b.1:c.669+151T>A | ||||
Intron_number | 5/7 | ||||
Y110A2AR.2g.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y110A2AR.2g.1:c.102+151T>A | ||||
Intron_number | 1/1 | ||||
Remark | [20081124 db] this Variation was previously named hw21421 | ||||
Method | WGS_Hawaiian_Waterston |