WormBase Tree Display for Variation: WBVar00167652
expand all nodes | collapse all nodes | view schema
WBVar00167652 | Name | Public_name | WBVar00167652 | ||
---|---|---|---|---|---|
Other_name | haw20902 | ||||
haw127171 | |||||
cewivar00181986 | |||||
Y47G7B.2.1:c.957A>G | |||||
CE19624:p.Glu319= | |||||
HGVSg | CHROMOSOME_II:g.2706889T>C | ||||
Sequence_details | SMap | S_parent | Sequence | Y47G7B | |
Flanking_sequences | cttaatatttacctcgatactccga | tcggacaatttctgaatctccttct | |||
Mapping_target | Y47G7B | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00547036 | |||
WBVar01364825 | |||||
Status | Live | ||||
Affects | Gene | WBGene00021654 | |||
Transcript | Y47G7B.2.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | Y47G7B.2.1:c.957A>G | ||||
HGVSp | CE19624:p.Glu319= | ||||
cDNA_position | 1033 | ||||
CDS_position | 957 | ||||
Protein_position | 319 | ||||
Exon_number | 4/6 | ||||
Codon_change | gaA/gaG | ||||
Amino_acid_change | E | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw20902 | ||||
Method | WGS_Hawaiian_Waterston |