WormBase Tree Display for Variation: WBVar00166713
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WBVar00166713 | Name | Public_name | WBVar00166713 | ||
---|---|---|---|---|---|
Other_name | haw19963 | ||||
cewivar00278880 | |||||
CE41547:p.Phe48= | |||||
CE07716:p.Phe48= | |||||
B0281.5b.1:c.144C>T | |||||
B0281.5a.1:c.144C>T | |||||
HGVSg | CHROMOSOME_II:g.2300625G>A | ||||
Sequence_details | SMap | S_parent | Sequence | B0281 | |
Flanking_sequences | caaagtgcttcggagaccgatcaat | aagaaacagttggaatcgtcctttt | |||
Mapping_target | B0281 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (16) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00015112 | |||
Transcript | B0281.5a.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | B0281.5a.1:c.144C>T | ||||
HGVSp | CE07716:p.Phe48= | ||||
cDNA_position | 287 | ||||
CDS_position | 144 | ||||
Protein_position | 48 | ||||
Exon_number | 3/6 | ||||
Codon_change | ttC/ttT | ||||
Amino_acid_change | F | ||||
B0281.5b.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | B0281.5b.1:c.144C>T | ||||
HGVSp | CE41547:p.Phe48= | ||||
cDNA_position | 257 | ||||
CDS_position | 144 | ||||
Protein_position | 48 | ||||
Exon_number | 3/6 | ||||
Codon_change | ttC/ttT | ||||
Amino_acid_change | F | ||||
Remark | [20081124 db] this Variation was previously named hw19963 | ||||
Method | WGS_Hawaiian_Waterston |