WormBase Tree Display for Variation: WBVar00166353
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| WBVar00166353 | Name | Public_name | WBVar00166353 | ||
|---|---|---|---|---|---|
| Other_name | haw19603 | ||||
| haw126187 | |||||
| cewivar00180305 | |||||
| CE39682:p.Ile71= | |||||
| CE29208:p.Ile124= | |||||
| C33C12.3b.1:c.213T>C | |||||
| C33C12.3a.1:c.372T>C | |||||
| HGVSg | CHROMOSOME_II:g.2178163T>C | ||||
| Sequence_details | SMap | S_parent | Sequence | C33C12 | |
| Flanking_sequences | tgccggacaaattgtcggatttgat | atgaaacaatatttttcggatacag | |||
| Mapping_target | C33C12 | ||||
| Type_of_mutation | Substitution | T | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
| WGS_Hawaiian_Waterston | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00546052 | |||
| WBVar01362694 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00016335 | |||
| Transcript | C33C12.3b.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | C33C12.3b.1:c.213T>C | ||||
| HGVSp | CE39682:p.Ile71= | ||||
| cDNA_position | 213 | ||||
| CDS_position | 213 | ||||
| Protein_position | 71 | ||||
| Exon_number | 2/11 | ||||
| Codon_change | atT/atC | ||||
| Amino_acid_change | I | ||||
| C33C12.3a.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | C33C12.3a.1:c.372T>C | ||||
| HGVSp | CE29208:p.Ile124= | ||||
| cDNA_position | 578 | ||||
| CDS_position | 372 | ||||
| Protein_position | 124 | ||||
| Exon_number | 5/15 | ||||
| Codon_change | atT/atC | ||||
| Amino_acid_change | I | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Remark | [20081124 db] this Variation was previously named hw19603 | ||||
| Method | WGS_Hawaiian_Waterston |
