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WormBase Tree Display for Variation: WBVar00166215

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Name Class

WBVar00166215NamePublic_nameWBVar00166215
Other_namehaw19465
haw126107
cewivar00083904
C40A11.2.1:c.*88C>A
C40A11.7.1:c.*54G>T
HGVSgCHROMOSOME_II:g.2148752C>A
Sequence_detailsSMapS_parentSequenceC40A11
Flanking_sequencesgttttcgagaattttcattataaaaaaatgtaaaaaatttgataaatgca
Mapping_targetC40A11
Type_of_mutationSubstitutionCA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00000034From_analysisMillion_mutation_project_reanalysis
WBStrain00004599From_analysisMillion_mutation_project_reanalysis
WBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
WBStrain00006625From_analysisMillion_mutation_project_reanalysis
WBStrain00006637From_analysisMillion_mutation_project_reanalysis
WBStrain00022850From_analysisWGS_De_Bono
Million_mutation_project_reanalysis
WBStrain00023191From_analysisMillion_mutation_project_reanalysis
WBStrain00023665From_analysisMillion_mutation_project_reanalysis
WBStrain00027652From_analysisMillion_mutation_project_reanalysis
WBStrain00031113From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01362490
WBVar01297531
WBVar00545972
StatusLive
AffectsGeneWBGene00305311
WBGene00016550
WBGene00016545
TranscriptC40A11.2.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScC40A11.2.1:c.*88C>A
cDNA_position743
Exon_number6/6
C40A11.12
C40A11.7.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScC40A11.7.1:c.*54G>T
cDNA_position868
Exon_number7/7
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw19465
MethodWGS_Hawaiian_Waterston