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WormBase Tree Display for Variation: WBVar00163560

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Name Class

WBVar00163560EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00163560
Other_namehaw16810
cewivar00175973
C08G5.7b.1:c.60+1196A>T
C08G5.7c.1:c.-37+1196A>T
C08G5.7c.2:c.-37+1196A>T
C08G5.7a.1:c.420+1196A>T
HGVSgCHROMOSOME_II:g.761087T>A
Sequence_detailsSMapS_parentSequenceC08G5
Flanking_sequencesattgtccaagtggcgcagtgggatttccccaaaagtagttcggagtagaa
Mapping_targetC08G5
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01358616
StatusLive
AffectsGeneWBGene00044418
TranscriptC08G5.7c.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC08G5.7c.2:c.-37+1196A>T
Intron_number1/5
C08G5.7c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC08G5.7c.1:c.-37+1196A>T
Intron_number2/6
C08G5.7b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC08G5.7b.1:c.60+1196A>T
Intron_number1/3
C08G5.7a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC08G5.7a.1:c.420+1196A>T
Intron_number4/7
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw16810
MethodWGS_Hawaiian_Waterston