WormBase Tree Display for Variation: WBVar00162860

WBVar00162860 Name: Public_name: WBVar00162860
    Other_name: pkP2132
      haw16110
      cewivar00175456
      T25D3.4c.1:c.534+95T>A
      T25D3.4a.1:c.864+95T>A
      T25D3.4b.1:c.738+95T>A
    HGVSg: CHROMOSOME_II:g.149586T>A
  Sequence_details: SMap: S_parent: Sequence: T25D3
    Flanking_sequences: aaatttgtttaacacaatatttttt aatcttttcatctaaaaaagtaact
    Mapping_target: T25D3
    Type_of_mutation: Substitution: T A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
          WGS_De_Bono
          WGS_Hawaiian_Waterston
          Million_mutation_project_reanalysis
    Laboratory: RW
      AX
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      Million_mutation_project_reanalysis
      SNP_Wicks
    History: Acquires_merge: WBVar00240500
        WBVar01357529
    Status: Live
  Affects: Gene: WBGene00020798
    Transcript: T25D3.4c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T25D3.4c.1:c.534+95T>A
        Intron_number: 3/5
      T25D3.4a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T25D3.4a.1:c.864+95T>A
        Intron_number: 8/11
      T25D3.4b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T25D3.4b.1:c.738+95T>A
        Intron_number: 5/8
  Reference: WBPaper00004703
    WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw16110
  Method: WGS_Hawaiian_Waterston