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WormBase Tree Display for Variation: WBVar00162781

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Name Class

WBVar00162781EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00162781
Other_namehaw16031
cewivar00175397
ZK337.1c.1:c.1641G>C
CE34450:p.Ala547=
CE16718:p.Ala547=
ZK337.1a.2:c.1641G>C
CE34451:p.Ala547=
ZK337.1a.1:c.1641G>C
ZK337.1c.2:c.1641G>C
ZK337.1b.1:c.1641G>C
HGVSgCHROMOSOME_I:g.14996807G>C
Sequence_detailsSMapS_parentSequenceZK337
Flanking_sequencesaaatgactgttaattccgaacatgcaccattagcttcccagcaacggcta
Mapping_targetZK337
Type_of_mutationSubstitutionGC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01357410
StatusLive
AffectsGeneWBGene00013969
TranscriptZK337.1a.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScZK337.1a.1:c.1641G>C
HGVSpCE16718:p.Ala547=
cDNA_position1787
CDS_position1641
Protein_position547
Exon_number10/20
Codon_changegcG/gcC
Amino_acid_changeA
ZK337.1b.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScZK337.1b.1:c.1641G>C
HGVSpCE34450:p.Ala547=
cDNA_position1746
CDS_position1641
Protein_position547
Exon_number9/20
Codon_changegcG/gcC
Amino_acid_changeA
ZK337.1a.2VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScZK337.1a.2:c.1641G>C
HGVSpCE16718:p.Ala547=
cDNA_position1707
CDS_position1641
Protein_position547
Exon_number9/19
Codon_changegcG/gcC
Amino_acid_changeA
ZK337.1c.2VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScZK337.1c.2:c.1641G>C
HGVSpCE34451:p.Ala547=
cDNA_position1676
CDS_position1641
Protein_position547
Exon_number9/19
Codon_changegcG/gcC
Amino_acid_changeA
ZK337.1c.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScZK337.1c.1:c.1641G>C
HGVSpCE34451:p.Ala547=
cDNA_position1735
CDS_position1641
Protein_position547
Exon_number10/20
Codon_changegcG/gcC
Amino_acid_changeA
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw16031
MethodWGS_Hawaiian_Waterston