WormBase Tree Display for Variation: WBVar00162781
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WBVar00162781 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00162781 | |||
Other_name | haw16031 | ||||
cewivar00175397 | |||||
ZK337.1c.1:c.1641G>C | |||||
CE34450:p.Ala547= | |||||
CE16718:p.Ala547= | |||||
ZK337.1a.2:c.1641G>C | |||||
CE34451:p.Ala547= | |||||
ZK337.1a.1:c.1641G>C | |||||
ZK337.1c.2:c.1641G>C | |||||
ZK337.1b.1:c.1641G>C | |||||
HGVSg | CHROMOSOME_I:g.14996807G>C | ||||
Sequence_details | SMap | S_parent | Sequence | ZK337 | |
Flanking_sequences | aaatgactgttaattccgaacatgc | accattagcttcccagcaacggcta | |||
Mapping_target | ZK337 | ||||
Type_of_mutation | Substitution | G | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01357410 | |||
Status | Live | ||||
Affects | Gene | WBGene00013969 | |||
Transcript | ZK337.1a.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | ZK337.1a.1:c.1641G>C | ||||
HGVSp | CE16718:p.Ala547= | ||||
cDNA_position | 1787 | ||||
CDS_position | 1641 | ||||
Protein_position | 547 | ||||
Exon_number | 10/20 | ||||
Codon_change | gcG/gcC | ||||
Amino_acid_change | A | ||||
ZK337.1b.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | ZK337.1b.1:c.1641G>C | ||||
HGVSp | CE34450:p.Ala547= | ||||
cDNA_position | 1746 | ||||
CDS_position | 1641 | ||||
Protein_position | 547 | ||||
Exon_number | 9/20 | ||||
Codon_change | gcG/gcC | ||||
Amino_acid_change | A | ||||
ZK337.1a.2 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | ZK337.1a.2:c.1641G>C | ||||
HGVSp | CE16718:p.Ala547= | ||||
cDNA_position | 1707 | ||||
CDS_position | 1641 | ||||
Protein_position | 547 | ||||
Exon_number | 9/19 | ||||
Codon_change | gcG/gcC | ||||
Amino_acid_change | A | ||||
ZK337.1c.2 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | ZK337.1c.2:c.1641G>C | ||||
HGVSp | CE34451:p.Ala547= | ||||
cDNA_position | 1676 | ||||
CDS_position | 1641 | ||||
Protein_position | 547 | ||||
Exon_number | 9/19 | ||||
Codon_change | gcG/gcC | ||||
Amino_acid_change | A | ||||
ZK337.1c.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | ZK337.1c.1:c.1641G>C | ||||
HGVSp | CE34451:p.Ala547= | ||||
cDNA_position | 1735 | ||||
CDS_position | 1641 | ||||
Protein_position | 547 | ||||
Exon_number | 10/20 | ||||
Codon_change | gcG/gcC | ||||
Amino_acid_change | A | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw16031 | ||||
Method | WGS_Hawaiian_Waterston |