WormBase Tree Display for Variation: WBVar00162737
expand all nodes | collapse all nodes | view schema
| WBVar00162737 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00162737 | |||
| Other_name | haw15987 | ||||
| cewivar00005296 | |||||
| ZK909.2g.1:c.23-8096C>T | |||||
| ZK909.2j.1:c.137-8096C>T | |||||
| ZK909.2n.1:c.683-8096C>T | |||||
| ZK909.2i.1:c.23-8096C>T | |||||
| ZK909.2h.1:c.137-8096C>T | |||||
| HGVSg | CHROMOSOME_I:g.14932805C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | F21F12 | |
| Flanking_sequences | tcatttttcatgctgctcacacttt | ctctcactttcaatctcttcttctt | |||
| Mapping_target | F21F12 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004602 | From_analysis | WGS_De_Bono | |||
| WGS_Hawaiian_Waterston | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00022850 | From_analysis | WGS_De_Bono | |||
| Million_mutation_project_reanalysis | |||||
| WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01357348 | |||
| WBVar01290726 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00002189 | |||
| Transcript | ZK909.2g.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK909.2g.1:c.23-8096C>T | ||||
| Intron_number | 1/6 | ||||
| ZK909.2n.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK909.2n.1:c.683-8096C>T | ||||
| Intron_number | 5/10 | ||||
| ZK909.2i.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK909.2i.1:c.23-8096C>T | ||||
| Intron_number | 1/6 | ||||
| ZK909.2h.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK909.2h.1:c.137-8096C>T | ||||
| Intron_number | 1/6 | ||||
| ZK909.2j.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK909.2j.1:c.137-8096C>T | ||||
| Intron_number | 1/6 | ||||
| Reference | WBPaper00037807 | ||||
| Remark | [20081124 db] this Variation was previously named hw15987 | ||||
| Method | WGS_Hawaiian_Waterston |
