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WormBase Tree Display for Variation: WBVar00162735

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Name Class

WBVar00162735EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00162735
Other_namehaw15985
cewivar00175365
ZK909.2n.1:c.683-9957T>C
ZK909.2g.1:c.22+7946T>C
ZK909.2h.1:c.137-9957T>C
ZK909.2j.1:c.137-9957T>C
ZK909.2i.1:c.22+7946T>C
HGVSgCHROMOSOME_I:g.14930944T>C
Sequence_detailsSMapS_parentSequenceF21F12
Flanking_sequencesagtttaaaaaatccattaaaaaaaaaaaattttcaacttttttcagcgca
Mapping_targetF21F12
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01357346
StatusLive
AffectsGeneWBGene00002189
TranscriptZK909.2g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZK909.2g.1:c.22+7946T>C
Intron_number1/6
ZK909.2n.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZK909.2n.1:c.683-9957T>C
Intron_number5/10
ZK909.2i.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZK909.2i.1:c.22+7946T>C
Intron_number1/6
ZK909.2h.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZK909.2h.1:c.137-9957T>C
Intron_number1/6
ZK909.2j.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZK909.2j.1:c.137-9957T>C
Intron_number1/6
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw15985
MethodWGS_Hawaiian_Waterston