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WormBase Tree Display for Variation: WBVar00162519

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Name Class

WBVar00162519NamePublic_nameWBVar00162519
Other_namehaw15769
haw123383
cewivar00136879
F39B2.5.1:c.291+260C>T
HGVSgCHROMOSOME_I:g.14775987G>A
Sequence_detailsSMapS_parentSequenceF39B2
Flanking_sequencesctttcggaaaatttgaatttttttattttcgaattttttaaaaagaaaaa
Mapping_targetF39B2
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004600From_analysisMillion_mutation_project_reanalysis
WBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
WBStrain00006629From_analysisMillion_mutation_project_reanalysis
WBStrain00006642From_analysisWGS_De_Bono
WBStrain00006643From_analysisMillion_mutation_project_reanalysis
WBStrain00006645From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01357028
WBVar01231759
WBVar00543248
StatusLive
AffectsGeneWBGene00009556
TranscriptF39B2.5.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF39B2.5.1:c.291+260C>T
Intron_number4/5
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw15769
MethodWGS_Hawaiian_Waterston