WormBase Tree Display for Variation: WBVar00162476

WBVar00162476 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar00162476
    Other_name: haw15726
      cewivar00175146
      K05C4.3.2:c.*480C>T
      K05C4.3.1:c.*539C>T
    HGVSg: CHROMOSOME_I:g.14748913G>A
  Sequence_details: SMap: S_parent: Sequence: K05C4
    Flanking_sequences: catcaaattgtgttgttgccatcac cgctgaagaaatctcaaatcgatat
    Mapping_target: K05C4
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_De_Bono
          WGS_Hawaiian_Waterston
          Million_mutation_project_reanalysis
      WBStrain00006629 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006642 From_analysis: WGS_De_Bono
      WBStrain00006643 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006645 From_analysis: Million_mutation_project_reanalysis
    Laboratory: RW
      AX
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01356961
        WBVar01429483
    Status: Live
  Affects: Gene: WBGene00010580
    Transcript: K05C4.3.2 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: K05C4.3.2:c.*480C>T
        cDNA_position: 1790
        Exon_number: 11/11
      K05C4.3.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: K05C4.3.1:c.*539C>T
        cDNA_position: 1864
        Exon_number: 11/11
  Reference: WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw15726
  Method: WGS_Hawaiian_Waterston