WormBase Tree Display for Variation: WBVar00162468
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WBVar00162468 | Name | Public_name | WBVar00162468 | ||
---|---|---|---|---|---|
Other_name | snp_K05C4[6] | ||||
haw15718 | |||||
cewivar00005051 | |||||
K05C4.5.1:c.1952-183T>C | |||||
HGVSg | CHROMOSOME_I:g.14747377T>C | ||||
Sequence_details | SMap | S_parent | Sequence | K05C4 | |
Flanking_sequences | taactgtggaattcccagaattaat | agctttttctagttttttgttgttg | |||
Mapping_target | K05C4 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (46) | |||||
Laboratory | RW | ||||
QX | |||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson1730 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
SNP_Wicks | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01356949 | |||
WBVar01429477 | |||||
WBVar01435051 | |||||
WBVar00245450 | |||||
Status | Live | ||||
Affects | Gene | WBGene00010582 | |||
Transcript | K05C4.5.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | K05C4.5.1:c.1952-183T>C | ||||
Intron_number | 5/6 | ||||
Reference | WBPaper00040707 | ||||
WBPaper00004703 | |||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw15718 | ||||
Method | WGS_Hawaiian_Waterston |