WormBase Tree Display for Variation: WBVar00162258
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| WBVar00162258 | Name | Public_name | WBVar00162258 | ||
|---|---|---|---|---|---|
| Other_name | haw15508 | ||||
| haw123201 | |||||
| cewivar00175038 | |||||
| Y105E8A.25c.1:c.95-21T>A | |||||
| Y105E8A.25a.1:c.1370-21T>A | |||||
| Y105E8A.25g.1:c.1073-21T>A | |||||
| Y105E8A.25b.1:c.1370-21T>A | |||||
| HGVSg | CHROMOSOME_I:g.14592273A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | Y105E8A | |
| Flanking_sequences | agagtctggaaatttggaaaaaaaa | atatatatggaatgaaaacattgag | |||
| Mapping_target | Y105E8A | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
| WGS_Hawaiian_Waterston | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01356625 | |||
| WBVar00543066 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00013682 | |||
| Transcript | Y105E8A.25c.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y105E8A.25c.1:c.95-21T>A | ||||
| Intron_number | 1/14 | ||||
| Y105E8A.25b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y105E8A.25b.1:c.1370-21T>A | ||||
| Intron_number | 8/24 | ||||
| Y105E8A.25a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y105E8A.25a.1:c.1370-21T>A | ||||
| Intron_number | 8/22 | ||||
| Y105E8A.25g.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y105E8A.25g.1:c.1073-21T>A | ||||
| Intron_number | 8/21 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Remark | [20081124 db] this Variation was previously named hw15508 | ||||
| Method | WGS_Hawaiian_Waterston |
