WormBase Tree Display for Variation: WBVar00162234
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WBVar00162234 | Name | Public_name | WBVar00162234 | ||
---|---|---|---|---|---|
Other_name | haw15484 | ||||
haw123185 | |||||
cewivar00004697 | |||||
Y105E8A.25d.1:c.1672+179G>T | |||||
Y105E8A.25g.1:c.3217+179G>T | |||||
Y105E8A.25f.1:c.2017+179G>T | |||||
Y105E8A.25a.1:c.3514+179G>T | |||||
Y105E8A.25e.1:c.1588+179G>T | |||||
Y105E8A.25c.1:c.2239+179G>T | |||||
Y105E8A.25b.1:c.3952+179G>T | |||||
HGVSg | CHROMOSOME_I:g.14574929C>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y105E8A | |
Flanking_sequences | aatccaattgtggtacctaaacaaa | tacaaagaaaaattcagctatggaa | |||
Mapping_target | Y105E8A | ||||
Type_of_mutation | Substitution | C | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (13) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00543050 | |||
WBVar01429084 | |||||
WBVar01356598 | |||||
WBVar01290355 | |||||
Status | Live | ||||
Affects | Gene | WBGene00013682 | |||
Transcript | Y105E8A.25c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y105E8A.25c.1:c.2239+179G>T | ||||
Intron_number | 11/14 | ||||
Y105E8A.25f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y105E8A.25f.1:c.2017+179G>T | ||||
Intron_number | 10/13 | ||||
Y105E8A.25b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y105E8A.25b.1:c.3952+179G>T | ||||
Intron_number | 19/24 | ||||
Y105E8A.25d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y105E8A.25d.1:c.1672+179G>T | ||||
Intron_number | 6/9 | ||||
Y105E8A.25e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y105E8A.25e.1:c.1588+179G>T | ||||
Intron_number | 5/8 | ||||
Y105E8A.25a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y105E8A.25a.1:c.3514+179G>T | ||||
Intron_number | 18/22 | ||||
Y105E8A.25g.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y105E8A.25g.1:c.3217+179G>T | ||||
Intron_number | 18/21 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw15484 | ||||
Method | WGS_Hawaiian_Waterston |