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WormBase Tree Display for Variation: WBVar00162234

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Name Class

WBVar00162234NamePublic_nameWBVar00162234
Other_namehaw15484
haw123185
cewivar00004697
Y105E8A.25d.1:c.1672+179G>T
Y105E8A.25g.1:c.3217+179G>T
Y105E8A.25f.1:c.2017+179G>T
Y105E8A.25a.1:c.3514+179G>T
Y105E8A.25e.1:c.1588+179G>T
Y105E8A.25c.1:c.2239+179G>T
Y105E8A.25b.1:c.3952+179G>T
HGVSgCHROMOSOME_I:g.14574929C>A
Sequence_detailsSMapS_parentSequenceY105E8A
Flanking_sequencesaatccaattgtggtacctaaacaaatacaaagaaaaattcagctatggaa
Mapping_targetY105E8A
Type_of_mutationSubstitutionCA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (13)
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00543050
WBVar01429084
WBVar01356598
WBVar01290355
StatusLive
AffectsGeneWBGene00013682
TranscriptY105E8A.25c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY105E8A.25c.1:c.2239+179G>T
Intron_number11/14
Y105E8A.25f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY105E8A.25f.1:c.2017+179G>T
Intron_number10/13
Y105E8A.25b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY105E8A.25b.1:c.3952+179G>T
Intron_number19/24
Y105E8A.25d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY105E8A.25d.1:c.1672+179G>T
Intron_number6/9
Y105E8A.25e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY105E8A.25e.1:c.1588+179G>T
Intron_number5/8
Y105E8A.25a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY105E8A.25a.1:c.3514+179G>T
Intron_number18/22
Y105E8A.25g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY105E8A.25g.1:c.3217+179G>T
Intron_number18/21
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw15484
MethodWGS_Hawaiian_Waterston