WormBase Tree Display for Variation: WBVar00162027

WBVar00162027 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar00162027
    Other_name: haw15277
      cewivar00004445
      Y105E8A.10c.1:c.-3-780G>A
      Y105E8A.10a.1:c.109-780G>A
    HGVSg: CHROMOSOME_I:g.14421633G>A
  Sequence_details: SMap: S_parent: Sequence: Y105E8A
    Flanking_sequences: ctcacactacaaactacaaagatgtacactaaaattaatg aaaatcatgatttttgctcaatttt
    Mapping_target: Y105E8A
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00000032 From_analysis: Million_mutation_project_reanalysis
      WBStrain00004602 From_analysis: WGS_De_Bono
          WGS_Hawaiian_Waterston
          Million_mutation_project_reanalysis
      WBStrain00006642 From_analysis: WGS_De_Bono
      WBStrain00022850 From_analysis: WGS_De_Bono
          Million_mutation_project_reanalysis
      WBStrain00023191 From_analysis: Million_mutation_project_reanalysis
    Laboratory: RW
      AX
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01290037
        WBVar01356346
        WBVar01428778
    Status: Live
  Affects: Gene: WBGene00013670
    Transcript: Y105E8A.10c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y105E8A.10c.1:c.-3-780G>A
        Intron_number: 1/10
      Y105E8A.10a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y105E8A.10a.1:c.109-780G>A
        Intron_number: 1/9
  Reference: WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw15277
  Method: WGS_Hawaiian_Waterston