WormBase Tree Display for Variation: WBVar00160669
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| WBVar00160669 | Name | Public_name | WBVar00160669 | ||
|---|---|---|---|---|---|
| Other_name | haw13919 | ||||
| cewivar00002626 | |||||
| Y40B1A.3c.1:c.977+298A>T | |||||
| Y40B1A.3a.1:c.851+298A>T | |||||
| Y40B1A.3e.1:c.860+298A>T | |||||
| Y40B1A.3b.1:c.944+298A>T | |||||
| Y40B1A.3d.1:c.983+298A>T | |||||
| HGVSg | CHROMOSOME_I:g.13356092A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | Y40B1A | |
| Flanking_sequences | tttcgaggttttttttttaaatttt | aattataaatctcgatttctccctc | |||
| Mapping_target | Y40B1A | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||
| WGS_Hawaiian_Waterston | |||||
| WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023192 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00012734 | |||
| Transcript | Y40B1A.3c.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y40B1A.3c.1:c.977+298A>T | ||||
| Intron_number | 7/11 | ||||
| Y40B1A.3e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y40B1A.3e.1:c.860+298A>T | ||||
| Intron_number | 5/8 | ||||
| Y40B1A.3d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y40B1A.3d.1:c.983+298A>T | ||||
| Intron_number | 7/11 | ||||
| Y40B1A.3a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y40B1A.3a.1:c.851+298A>T | ||||
| Intron_number | 5/9 | ||||
| Y40B1A.3b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y40B1A.3b.1:c.944+298A>T | ||||
| Intron_number | 5/9 | ||||
| Remark | [20081124 db] this Variation was previously named hw13919 | ||||
| Method | WGS_Hawaiian_Waterston |
