WormBase Tree Display for Variation: WBVar00160374
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| WBVar00160374 | Name | Public_name | WBVar00160374 | ||
|---|---|---|---|---|---|
| Other_name | haw13624 | ||||
| haw121945 | |||||
| cewivar00135410 | |||||
| CE19343:p.Ala391Ser | |||||
| ZK1225.4.1:c.1171G>T | |||||
| HGVSg | CHROMOSOME_I:g.13214546C>A | ||||
| Sequence_details | SMap | S_parent | Sequence | ZK1225 | |
| Flanking_sequences | acctcatatgtaggacttgtcagcg | tacaatagcttcggcgaaattgtac | |||
| Mapping_target | ZK1225 | ||||
| Type_of_mutation | Substitution | C | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004602 | From_analysis | WGS_De_Bono | |||
| WGS_Hawaiian_Waterston | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01353899 | |||
| WBVar00541810 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00014238 | |||
| Transcript | ZK1225.4.1 | VEP_consequence | missense_variant | ||
| VEP_impact | MODERATE | ||||
| HGVSc | ZK1225.4.1:c.1171G>T | ||||
| HGVSp | CE19343:p.Ala391Ser | ||||
| cDNA_position | 1195 | ||||
| CDS_position | 1171 | ||||
| Protein_position | 391 | ||||
| Exon_number | 7/9 | ||||
| Codon_change | Gcg/Tcg | ||||
| Amino_acid_change | A/S | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Remark | [20081124 db] this Variation was previously named hw13624 | ||||
| Method | WGS_Hawaiian_Waterston |
