WormBase Tree Display for Variation: WBVar00158268

WBVar00158268 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar00158268
    Other_name: haw11518
      cewivar00171263
      F58D5.4c.1:c.625-627T>A
      F58D5.4a.1:c.901-627T>A
      F58D5.4b.1:c.781-627T>A
    HGVSg: CHROMOSOME_I:g.12051132A>T
  Sequence_details: SMap: S_parent: Sequence: F58D5
    Flanking_sequences: tcgcatttatatagcaaaaaaaaac gtaattttataaaaaactttgggat
    Mapping_target: F58D5
    Type_of_mutation: Substitution: A T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_De_Bono
          WGS_Hawaiian_Waterston
          Million_mutation_project_reanalysis
    Laboratory: RW
      AX
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01350696
    Status: Live
  Affects: Gene: WBGene00002240
    Transcript: F58D5.4c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F58D5.4c.1:c.625-627T>A
        Intron_number: 3/4
      F58D5.4b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F58D5.4b.1:c.781-627T>A
        Intron_number: 6/8
      F58D5.4a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F58D5.4a.1:c.901-627T>A
        Intron_number: 6/8
  Reference: WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw11518
  Method: WGS_Hawaiian_Waterston