WormBase Tree Display for Variation: WBVar00157330

WBVar00157330 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar00157330
    Other_name: haw10580
      cewivar00170112
      F15D3.1j.1:c.-161-68C>T
      F15D3.1h.1:c.3317-68C>T
      F15D3.1c.1:c.2639-68C>T
      F15D3.1i.1:c.2639-68C>T
      F15D3.1a.1:c.3317-68C>T
    HGVSg: CHROMOSOME_I:g.11546930G>A
  Sequence_details: SMap: S_parent: Sequence: F15D3
    Flanking_sequences: ctaaaaaaatatgtttttctttgaa taaaaatgcaagagttggcggctca
    Mapping_target: F15D3
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_De_Bono
          WGS_Hawaiian_Waterston
          Million_mutation_project_reanalysis
    Laboratory: RW
      AX
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01349310
    Status: Live
  Affects: Gene: WBGene00001131
    Transcript: F15D3.1j.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F15D3.1j.1:c.-161-68C>T
        Intron_number: 7/39
      F15D3.1a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F15D3.1a.1:c.3317-68C>T
        Intron_number: 15/48
      F15D3.1i.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F15D3.1i.1:c.2639-68C>T
        Intron_number: 10/41
      F15D3.1c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F15D3.1c.1:c.2639-68C>T
        Intron_number: 10/42
      F15D3.1h.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F15D3.1h.1:c.3317-68C>T
        Intron_number: 14/46
  Reference: WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw10580
  Method: WGS_Hawaiian_Waterston