WormBase Tree Display for Variation: WBVar00157301
expand all nodes | collapse all nodes | view schema
WBVar00157301 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00157301 | |||
Other_name | haw10551 | ||||
cewivar00170073 | |||||
F32B4.4b.2:c.-158+1863C>T | |||||
F32B4.5a.1:c.220-22G>A | |||||
F32B4.4a.1:c.123+1863C>T | |||||
F32B4.4b.3:c.-158+1863C>T | |||||
HGVSg | CHROMOSOME_I:g.11519605C>T | ||||
Sequence_details | SMap | S_parent | Sequence | F32B4 | |
Flanking_sequences | tggcctggaataaagagcagcgatt | ttggtttcggtgcatttcctgcttt | |||
Mapping_target | F32B4 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (23) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01284990 | |||
WBVar01423927 | |||||
WBVar01349259 | |||||
Status | Live | ||||
Affects | Gene | WBGene00009314 | |||
WBGene00009315 | |||||
Transcript | F32B4.4b.3 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F32B4.4b.3:c.-158+1863C>T | ||||
Intron_number | 1/8 | ||||
F32B4.5a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F32B4.5a.1:c.220-22G>A | ||||
Intron_number | 2/6 | ||||
F32B4.4a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F32B4.4a.1:c.123+1863C>T | ||||
Intron_number | 3/10 | ||||
F32B4.4b.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F32B4.4b.2:c.-158+1863C>T | ||||
Intron_number | 2/9 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw10551 | ||||
Method | WGS_Hawaiian_Waterston |