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WormBase Tree Display for Variation: WBVar00156253

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Name Class

WBVar00156253NamePublic_nameWBVar00156253
Other_namehaw9503
haw118879
cewivar00169155
K10C3.6b.2:c.239-213A>T
K10C3.6d.1:c.266-213A>T
K10C3.6c.1:c.311-213A>T
K10C3.6a.2:c.239-213A>T
K10C3.6a.1:c.239-213A>T
K10C3.6b.1:c.239-213A>T
HGVSgCHROMOSOME_I:g.9872481A>T
Sequence_detailsSMapS_parentSequenceK10C3
Flanking_sequencesaattttgaatgatttctttttttttaatttaccaaaaaattatattgaaa
Mapping_targetK10C3
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
WBStrain00027652From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00538744
WBVar01347690
StatusLive
AffectsGeneWBGene00003639
TranscriptK10C3.6a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK10C3.6a.1:c.239-213A>T
Intron_number3/7
K10C3.6d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK10C3.6d.1:c.266-213A>T
Intron_number3/6
K10C3.6a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK10C3.6a.2:c.239-213A>T
Intron_number4/8
K10C3.6c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK10C3.6c.1:c.311-213A>T
Intron_number3/6
K10C3.6b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK10C3.6b.1:c.239-213A>T
Intron_number3/7
K10C3.6b.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK10C3.6b.2:c.239-213A>T
Intron_number4/8
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw9503
MethodWGS_Hawaiian_Waterston