WormBase Tree Display for Variation: WBVar00156253
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WBVar00156253 | Name | Public_name | WBVar00156253 | ||
---|---|---|---|---|---|
Other_name | haw9503 | ||||
haw118879 | |||||
cewivar00169155 | |||||
K10C3.6b.2:c.239-213A>T | |||||
K10C3.6d.1:c.266-213A>T | |||||
K10C3.6c.1:c.311-213A>T | |||||
K10C3.6a.2:c.239-213A>T | |||||
K10C3.6a.1:c.239-213A>T | |||||
K10C3.6b.1:c.239-213A>T | |||||
HGVSg | CHROMOSOME_I:g.9872481A>T | ||||
Sequence_details | SMap | S_parent | Sequence | K10C3 | |
Flanking_sequences | aattttgaatgatttcttttttttt | aatttaccaaaaaattatattgaaa | |||
Mapping_target | K10C3 | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00538744 | |||
WBVar01347690 | |||||
Status | Live | ||||
Affects | Gene | WBGene00003639 | |||
Transcript | K10C3.6a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | K10C3.6a.1:c.239-213A>T | ||||
Intron_number | 3/7 | ||||
K10C3.6d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K10C3.6d.1:c.266-213A>T | ||||
Intron_number | 3/6 | ||||
K10C3.6a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K10C3.6a.2:c.239-213A>T | ||||
Intron_number | 4/8 | ||||
K10C3.6c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K10C3.6c.1:c.311-213A>T | ||||
Intron_number | 3/6 | ||||
K10C3.6b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K10C3.6b.1:c.239-213A>T | ||||
Intron_number | 3/7 | ||||
K10C3.6b.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K10C3.6b.2:c.239-213A>T | ||||
Intron_number | 4/8 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw9503 | ||||
Method | WGS_Hawaiian_Waterston |