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WormBase Tree Display for Variation: WBVar00155290

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Name Class

WBVar00155290EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00155290
Other_namehaw8540
cewivar00168002
C36B1.1d.1:c.3273-269G>A
C36B1.1c.1:c.1698-269G>A
C36B1.1b.1:c.2082-269G>A
C36B1.1a.1:c.3162-269G>A
HGVSgCHROMOSOME_I:g.8706670C>T
Sequence_detailsSMapS_parentSequenceF39H11
Flanking_sequencesctgaaagttgaacaattgggtgcaaagtaaaagagattatactgtagtct
Mapping_targetF39H11
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
WBStrain00006642From_analysisWGS_De_Bono
WBStrain00006643From_analysisMillion_mutation_project_reanalysis
WBStrain00006645From_analysisMillion_mutation_project_reanalysis
WBStrain00027652From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01422346
WBVar01346460
StatusLive
AffectsGeneWBGene00000527
TranscriptC36B1.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC36B1.1b.1:c.2082-269G>A
Intron_number13/16
C36B1.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC36B1.1a.1:c.3162-269G>A
Intron_number18/21
C36B1.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC36B1.1c.1:c.1698-269G>A
Intron_number6/9
C36B1.1d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC36B1.1d.1:c.3273-269G>A
Intron_number20/22
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw8540
MethodWGS_Hawaiian_Waterston