WormBase Tree Display for Variation: WBVar00155290
expand all nodes | collapse all nodes | view schema
WBVar00155290 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00155290 | |||
Other_name | haw8540 | ||||
cewivar00168002 | |||||
C36B1.1d.1:c.3273-269G>A | |||||
C36B1.1c.1:c.1698-269G>A | |||||
C36B1.1b.1:c.2082-269G>A | |||||
C36B1.1a.1:c.3162-269G>A | |||||
HGVSg | CHROMOSOME_I:g.8706670C>T | ||||
Sequence_details | SMap | S_parent | Sequence | F39H11 | |
Flanking_sequences | ctgaaagttgaacaattgggtgcaa | agtaaaagagattatactgtagtct | |||
Mapping_target | F39H11 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00006642 | From_analysis | WGS_De_Bono | |||
WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01422346 | |||
WBVar01346460 | |||||
Status | Live | ||||
Affects | Gene | WBGene00000527 | |||
Transcript | C36B1.1b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C36B1.1b.1:c.2082-269G>A | ||||
Intron_number | 13/16 | ||||
C36B1.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C36B1.1a.1:c.3162-269G>A | ||||
Intron_number | 18/21 | ||||
C36B1.1c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C36B1.1c.1:c.1698-269G>A | ||||
Intron_number | 6/9 | ||||
C36B1.1d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C36B1.1d.1:c.3273-269G>A | ||||
Intron_number | 20/22 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw8540 | ||||
Method | WGS_Hawaiian_Waterston |