WormBase Tree Display for Variation: WBVar00154965
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| WBVar00154965 | Name | Public_name | WBVar00154965 | ||
|---|---|---|---|---|---|
| Other_name (12) | |||||
| HGVSg | CHROMOSOME_I:g.8202274C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | F08A10 | |
| Flanking_sequences | tttttccaacgcttctccttctttt | ctgtgttttcattcctttgcacttc | |||
| Mapping_target | F08A10 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
| WGS_Hawaiian_Waterston | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00537903 | |||
| WBVar01346061 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00008570 | |||
| Transcript | F08A10.1h.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F08A10.1h.1:c.493+2319C>T | ||||
| Intron_number | 5/13 | ||||
| F08A10.1k.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F08A10.1k.1:c.679+2340C>T | ||||
| Intron_number | 8/16 | ||||
| F08A10.1e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F08A10.1e.1:c.595+2319C>T | ||||
| Intron_number | 6/14 | ||||
| F08A10.1f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F08A10.1f.1:c.592+2319C>T | ||||
| Intron_number | 12/21 | ||||
| F08A10.1f.2 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F08A10.1f.2:c.592+2319C>T | ||||
| Intron_number | 9/18 | ||||
| F08A10.1j.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F08A10.1j.1:c.1102+2340C>T | ||||
| Intron_number | 11/19 | ||||
| F08A10.1i.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F08A10.1i.1:c.493+2319C>T | ||||
| Intron_number | 5/13 | ||||
| F08A10.1d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F08A10.1d.1:c.472+2340C>T | ||||
| Intron_number | 5/13 | ||||
| F08A10.1a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F08A10.1a.1:c.493+2319C>T | ||||
| Intron_number | 6/15 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Remark | [20081124 db] this Variation was previously named hw8215 | ||||
| Method | WGS_Hawaiian_Waterston |
