WormBase Tree Display for Variation: WBVar00154799
expand all nodes | collapse all nodes | view schema
WBVar00154799 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00154799 | |||
Other_name | haw8049 | ||||
cewivar00167461 | |||||
H05L14.2a.1:c.*162C>A | |||||
H05L14.2e.1:c.*326C>A | |||||
H05L14.2b.1:c.*162C>A | |||||
HGVSg | CHROMOSOME_I:g.7992877C>A | ||||
Sequence_details | SMap | S_parent | Sequence | C54G4 | |
Flanking_sequences | gattttttttccaattttgcaaaaa | aaatgatttcaaaatgactctactc | |||
Mapping_target | C54G4 | ||||
Type_of_mutation | Substitution | C | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01345868 | |||
Status | Live | ||||
Affects | Gene | WBGene00010367 | |||
Transcript | H05L14.2b.1 | VEP_consequence | 3_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | H05L14.2b.1:c.*162C>A | ||||
cDNA_position | 5031 | ||||
Exon_number | 13/13 | ||||
H05L14.2e.1 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | H05L14.2e.1:c.*326C>A | ||||
cDNA_position | 5024 | ||||
Exon_number | 13/13 | ||||
H05L14.2a.1 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | H05L14.2a.1:c.*162C>A | ||||
cDNA_position | 5213 | ||||
Exon_number | 15/15 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw8049 | ||||
Method | WGS_Hawaiian_Waterston |