WormBase Tree Display for Variation: WBVar00154570

WBVar00154570 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar00154570
    Other_name: haw7820
      cewivar00167194
      CE19925:p.Ser672=
      H15N14.2a.1:c.2016A>T
      H15N14.2b.1:c.1818A>T
      CE15513:p.Ser606=
    HGVSg: CHROMOSOME_I:g.7767955T>A
  Sequence_details: SMap: S_parent: Sequence: ZK1014
    Flanking_sequences: tatcgattagaagaacactgagctt gatcgtttcgcatcttcaaaagctt
    Mapping_target: ZK1014
    Type_of_mutation: Substitution: T A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_De_Bono
          WGS_Hawaiian_Waterston
          Million_mutation_project_reanalysis
      WBStrain00027652 From_analysis: Million_mutation_project_reanalysis
    Laboratory: RW
      AX
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01345582
    Status: Live
  Affects: Gene: WBGene00003818
    Transcript: H15N14.2a.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: H15N14.2a.1:c.2016A>T
        HGVSp: CE19925:p.Ser672=
        cDNA_position: 2039
        CDS_position: 2016
        Protein_position: 672
        Exon_number: 11/15
        Codon_change: tcA/tcT
        Amino_acid_change: S
      H15N14.2b.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: H15N14.2b.1:c.1818A>T
        HGVSp: CE15513:p.Ser606=
        cDNA_position: 1818
        CDS_position: 1818
        Protein_position: 606
        Exon_number: 8/11
        Codon_change: tcA/tcT
        Amino_acid_change: S
  Reference: WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw7820
  Method: WGS_Hawaiian_Waterston