WormBase Tree Display for Variation: WBVar00154403
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WBVar00154403 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00154403 | |||
Other_name | haw7653 | ||||
cewivar00167002 | |||||
CE09079:p.Gln378= | |||||
D2030.2a.1:c.1134G>A | |||||
D2030.2b.1:c.786G>A | |||||
D2030.2a.2:c.1134G>A | |||||
CE35176:p.Gln262= | |||||
HGVSg | CHROMOSOME_I:g.7577556G>A | ||||
Sequence_details | SMap | S_parent | Sequence | D2030 | |
Flanking_sequences | ctggaaagaaaggaatgggatctca | caagatcaagttcaaatcgacacaa | |||
Mapping_target | D2030 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01345376 | |||
Status | Live | ||||
Affects | Gene | WBGene00008412 | |||
Transcript | D2030.2a.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | D2030.2a.1:c.1134G>A | ||||
HGVSp | CE09079:p.Gln378= | ||||
cDNA_position | 1173 | ||||
CDS_position | 1134 | ||||
Protein_position | 378 | ||||
Exon_number | 5/8 | ||||
Codon_change | caG/caA | ||||
Amino_acid_change | Q | ||||
D2030.2a.2 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | D2030.2a.2:c.1134G>A | ||||
HGVSp | CE09079:p.Gln378= | ||||
cDNA_position | 1137 | ||||
CDS_position | 1134 | ||||
Protein_position | 378 | ||||
Exon_number | 5/8 | ||||
Codon_change | caG/caA | ||||
Amino_acid_change | Q | ||||
D2030.2b.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | D2030.2b.1:c.786G>A | ||||
HGVSp | CE35176:p.Gln262= | ||||
cDNA_position | 1055 | ||||
CDS_position | 786 | ||||
Protein_position | 262 | ||||
Exon_number | 4/7 | ||||
Codon_change | caG/caA | ||||
Amino_acid_change | Q | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw7653 | ||||
Method | WGS_Hawaiian_Waterston |