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WormBase Tree Display for Variation: WBVar00154050

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Name Class

WBVar00154050NamePublic_nameWBVar00154050
Other_namehaw7300
haw117448
cewivar00166622
K06A5.8d.2:c.743-1593C>A
K06A5.8d.1:c.743-1593C>A
K06A5.8b.1:c.1541-1593C>A
K06A5.8a.1:c.1541-1593C>A
K06A5.8b.2:c.1541-1593C>A
HGVSgCHROMOSOME_I:g.6481440G>T
Sequence_detailsSMapS_parentSequenceK06A5
Flanking_sequencesaaaactgtattttttccataaattagttttaaatatttgtatttgaccat
Mapping_targetK06A5
Type_of_mutationSubstitutionGT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
WBStrain00022850From_analysisWGS_De_Bono
Million_mutation_project_reanalysis
WBStrain00027652From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01283264
WBVar00537313
WBVar01344957
StatusLive
AffectsGeneWBGene00019434
TranscriptK06A5.8d.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK06A5.8d.2:c.743-1593C>A
Intron_number10/20
K06A5.8d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK06A5.8d.1:c.743-1593C>A
Intron_number10/19
K06A5.8b.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK06A5.8b.2:c.1541-1593C>A
Intron_number9/21
K06A5.8b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK06A5.8b.1:c.1541-1593C>A
Intron_number10/21
K06A5.8a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK06A5.8a.1:c.1541-1593C>A
Intron_number10/21
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw7300
MethodWGS_Hawaiian_Waterston