WormBase Tree Display for Variation: WBVar00154024
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| WBVar00154024 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00154024 | |||
| Other_name | haw7274 | ||||
| cewivar00166594 | |||||
| ZC308.1b.1:c.*636A>T | |||||
| ZC308.1c.1:c.*636A>T | |||||
| ZC308.1a.2:c.*636A>T | |||||
| ZC308.1a.1:c.*636A>T | |||||
| HGVSg | CHROMOSOME_I:g.6385720A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | ZC308 | |
| Flanking_sequences | ctgaaaattttcagatcaataagat | aaaaaaaaacgaatccattcttgtt | |||
| Mapping_target | ZC308 | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
| WGS_Hawaiian_Waterston | |||||
| Million_mutation_project_reanalysis | |||||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01344925 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00001596 | |||
| Transcript | ZC308.1a.1 | VEP_consequence | 3_prime_UTR_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZC308.1a.1:c.*636A>T | ||||
| cDNA_position | 4194 | ||||
| Exon_number | 22/22 | ||||
| ZC308.1a.2 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZC308.1a.2:c.*636A>T | ||||
| cDNA_position | 4073 | ||||
| Exon_number | 21/21 | ||||
| ZC308.1b.1 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZC308.1b.1:c.*636A>T | ||||
| cDNA_position | 3311 | ||||
| Exon_number | 11/11 | ||||
| ZC308.1c.1 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZC308.1c.1:c.*636A>T | ||||
| cDNA_position | 3784 | ||||
| Exon_number | 14/14 | ||||
| Reference | WBPaper00037807 | ||||
| Remark | [20081124 db] this Variation was previously named hw7274 | ||||
| Method | WGS_Hawaiian_Waterston |
