WormBase Tree Display for Variation: WBVar00153944
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| WBVar00153944 | Name | Public_name | WBVar00153944 | ||
|---|---|---|---|---|---|
| Other_name | haw7194 | ||||
| haw117376 | |||||
| cewivar00166502 | |||||
| C27A12.7a.2:c.891A>T | |||||
| CE08416:p.Gly297= | |||||
| C27A12.7a.1:c.891A>T | |||||
| HGVSg | CHROMOSOME_I:g.6057153T>A | ||||
| Sequence_details | SMap | S_parent | Sequence | C27A12 | |
| Flanking_sequences | tgttcttacaggtaatctgattgca | ccaccgtttttctcaattgtcgcca | |||
| Mapping_target | C27A12 | ||||
| Type_of_mutation | Substitution | T | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
| WGS_Hawaiian_Waterston | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022850 | From_analysis | WGS_De_Bono | |||
| Million_mutation_project_reanalysis | |||||
| WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01283144 | |||
| WBVar00537241 | |||||
| WBVar01344825 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00305288 | |||
| WBGene00016157 | |||||
| Transcript | C27A12.14 | ||||
| C27A12.7a.2 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | C27A12.7a.2:c.891A>T | ||||
| HGVSp | CE08416:p.Gly297= | ||||
| cDNA_position | 892 | ||||
| CDS_position | 891 | ||||
| Protein_position | 297 | ||||
| Exon_number | 6/10 | ||||
| Codon_change | ggA/ggT | ||||
| Amino_acid_change | G | ||||
| C27A12.7a.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | C27A12.7a.1:c.891A>T | ||||
| HGVSp | CE08416:p.Gly297= | ||||
| cDNA_position | 1035 | ||||
| CDS_position | 891 | ||||
| Protein_position | 297 | ||||
| Exon_number | 7/11 | ||||
| Codon_change | ggA/ggT | ||||
| Amino_acid_change | G | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Remark | [20081124 db] this Variation was previously named hw7194 | ||||
| Method | WGS_Hawaiian_Waterston |
