WormBase Tree Display for Variation: WBVar00153571
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| WBVar00153571 | Name | Public_name | WBVar00153571 | ||
|---|---|---|---|---|---|
| Other_name | haw6821 | ||||
| haw117151 | |||||
| cewivar00166077 | |||||
| C24A11.8a.1:c.*208T>G | |||||
| C24A11.8c.1:c.*208T>G | |||||
| C24A11.8b.1:c.*208T>G | |||||
| C24A11.8b.2:c.*208T>G | |||||
| C24A11.8a.2:c.*208T>G | |||||
| HGVSg | CHROMOSOME_I:g.5403113A>C | ||||
| Sequence_details | SMap | S_parent | Sequence | C24A11 | |
| Flanking_sequences | aaaaggaattttaaaaaagaagaaa | aaccagcgaagaggatgaatttgta | |||
| Mapping_target | C24A11 | ||||
| Type_of_mutation | Substitution | A | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
| WGS_Hawaiian_Waterston | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022850 | From_analysis | WGS_De_Bono | |||
| Million_mutation_project_reanalysis | |||||
| WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01344362 | |||
| WBVar01282764 | |||||
| WBVar00537016 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00001491 | |||
| Transcript | C24A11.8a.1 | VEP_consequence | 3_prime_UTR_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | C24A11.8a.1:c.*208T>G | ||||
| cDNA_position | 2122 | ||||
| Exon_number | 18/18 | ||||
| C24A11.8b.2 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C24A11.8b.2:c.*208T>G | ||||
| cDNA_position | 2146 | ||||
| Exon_number | 19/19 | ||||
| C24A11.8a.2 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C24A11.8a.2:c.*208T>G | ||||
| cDNA_position | 2179 | ||||
| Exon_number | 19/19 | ||||
| C24A11.8c.1 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C24A11.8c.1:c.*208T>G | ||||
| cDNA_position | 2231 | ||||
| Exon_number | 20/20 | ||||
| C24A11.8b.1 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C24A11.8b.1:c.*208T>G | ||||
| cDNA_position | 2203 | ||||
| Exon_number | 20/20 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Remark | [20081124 db] this Variation was previously named hw6821 | ||||
| Method | WGS_Hawaiian_Waterston |
