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WormBase Tree Display for Variation: WBVar00153420

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Name Class

WBVar00153420NamePublic_nameWBVar00153420
Other_namehaw6670
haw117049
cewivar00165903
F28B3.4b.1:c.1057-1146T>G
F28B3.4i.1:c.979-1146T>G
F28B3.4f.1:c.636+191T>G
F28B3.4j.1:c.979-1146T>G
F28B3.4g.1:c.1057-1146T>G
F28B3.4c.1:c.636+191T>G
HGVSgCHROMOSOME_I:g.4942484T>G
Sequence_detailsSMapS_parentSequenceF28B3
Flanking_sequencesatttggaaactaaaatgttggctattttcttttttttcttaattttttgt
Mapping_targetF28B3
Type_of_mutationSubstitutionTG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01344167
WBVar00536914
StatusLive
AffectsGeneWBGene00017885
TranscriptF28B3.4g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF28B3.4g.1:c.1057-1146T>G
Intron_number9/17
F28B3.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF28B3.4b.1:c.1057-1146T>G
Intron_number9/17
F28B3.4j.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF28B3.4j.1:c.979-1146T>G
Intron_number6/13
F28B3.4i.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF28B3.4i.1:c.979-1146T>G
Intron_number6/13
F28B3.4f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF28B3.4f.1:c.636+191T>G
Intron_number2/10
F28B3.4c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF28B3.4c.1:c.636+191T>G
Intron_number1/8
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw6670
MethodWGS_Hawaiian_Waterston