WormBase Tree Display for Variation: WBVar00152472

WBVar00152472 Name: Public_name: WBVar00152472
    Other_name: haw5722
      haw116407
      cewivar00165003
      Y47G6A.23b.1:c.1539+85G>T
      Y47G6A.23d.1:c.1539+85G>T
      Y47G6A.23c.1:c.1533+85G>T
      Y47G6A.23a.1:c.1533+85G>T
    HGVSg: CHROMOSOME_I:g.3594527C>A
  Sequence_details: SMap: S_parent: Sequence: Y47G6A
    Flanking_sequences: ttggatttttgcttgctcgaaaatg aaaatttcgaatttttttgttttga
    Mapping_target: Y47G6A
    Type_of_mutation: Substitution: C A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_De_Bono
          WGS_Hawaiian_Waterston
          WGS_Yanai
          Million_mutation_project_reanalysis
    Laboratory: RW
      AX
    Person: WBPerson1562
      WBPerson4037
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      WGS_Yanai
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01342866
        WBVar00536272
    Status: Live
  Affects: Gene: WBGene00003060
    Transcript: Y47G6A.23c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y47G6A.23c.1:c.1533+85G>T
        Intron_number: 7/31
      Y47G6A.23b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y47G6A.23b.1:c.1539+85G>T
        Intron_number: 8/31
      Y47G6A.23a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y47G6A.23a.1:c.1533+85G>T
        Intron_number: 8/32
      Y47G6A.23d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y47G6A.23d.1:c.1539+85G>T
        Intron_number: 8/32
  Reference: WBPaper00038208
    WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw5722
  Method: WGS_Hawaiian_Waterston