WormBase Tree Display for Variation: WBVar00152463

WBVar00152463 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar00152463
    Other_name: haw5713
      cewivar00164991
      Y47G6A.23d.1:c.2836-400A>G
      Y47G6A.23c.1:c.2830-400A>G
      Y47G6A.23a.1:c.2830-400A>G
      Y47G6A.23b.1:c.2836-400A>G
    HGVSg: CHROMOSOME_I:g.3588685T>C
  Sequence_details: SMap: S_parent: Sequence: Y47G6A
    Flanking_sequences: aaaaaaaaactttttttggtcagtg tcttaaaaaattttggttcttttta
    Mapping_target: Y47G6A
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_De_Bono
          WGS_Hawaiian_Waterston
          Million_mutation_project_reanalysis
    Laboratory: RW
      AX
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01342853
    Status: Live
  Affects: Gene: WBGene00003060
    Transcript: Y47G6A.23c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y47G6A.23c.1:c.2830-400A>G
        Intron_number: 13/31
      Y47G6A.23b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y47G6A.23b.1:c.2836-400A>G
        Intron_number: 14/31
      Y47G6A.23a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y47G6A.23a.1:c.2830-400A>G
        Intron_number: 14/32
      Y47G6A.23d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y47G6A.23d.1:c.2836-400A>G
        Intron_number: 14/32
  Reference: WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw5713
  Method: WGS_Hawaiian_Waterston