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WormBase Tree Display for Variation: WBVar00152378

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Name Class

WBVar00152378NamePublic_nameWBVar00152378
Other_namehaw5628
haw116351
cewivar00073082
Y47G6A.20b.1:c.1794+153A>T
HGVSgCHROMOSOME_I:g.3541182T>A
Sequence_detailsSMapS_parentSequenceY47G6A
Flanking_sequencestttaaatattttaaatttaaatttttttaattcactataaattttttaaa
Mapping_targetY47G6A
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00000034From_analysisMillion_mutation_project_reanalysis
WBStrain00004599From_analysisMillion_mutation_project_reanalysis
WBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
WBStrain00006625From_analysisMillion_mutation_project_reanalysis
WBStrain00022886From_analysisMillion_mutation_project_reanalysis
WBStrain00023286From_analysisMillion_mutation_project_reanalysis
WBStrain00027652From_analysisMillion_mutation_project_reanalysis
WBStrain00027662From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00536216
WBVar01342739
StatusLive
AffectsGeneWBGene00004389
TranscriptY47G6A.20b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY47G6A.20b.1:c.1794+153A>T
Intron_number9/10
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw5628
MethodWGS_Hawaiian_Waterston