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WormBase Tree Display for Variation: WBVar00151833

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Name Class

WBVar00151833NamePublic_nameWBVar00151833
Other_namehaw5083
haw115970
cewivar00164409
Y54E10A.9c.2:c.*1039T>C
Y54E10A.9b.1:c.*1039T>C
Y54E10A.9a.1:c.*1039T>C
Y54E10A.9c.1:c.*1039T>C
HGVSgCHROMOSOME_I:g.3158725A>G
Sequence_detailsSMapS_parentSequenceK09H9
Flanking_sequencesgcagttggttggggagaaattggcaatagaaattgaagagaaagcgtgga
Mapping_targetK09H9
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00535835
WBVar01341944
StatusLive
AffectsGeneWBGene00006888
TranscriptY54E10A.9c.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScY54E10A.9c.1:c.*1039T>C
cDNA_position3232
Exon_number10/10
Y54E10A.9a.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScY54E10A.9a.1:c.*1039T>C
cDNA_position3073
Exon_number10/10
Y54E10A.9c.2VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScY54E10A.9c.2:c.*1039T>C
cDNA_position3057
Exon_number9/9
Y54E10A.9b.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScY54E10A.9b.1:c.*1039T>C
cDNA_position3082
Exon_number10/10
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw5083
MethodWGS_Hawaiian_Waterston