WormBase Tree Display for Variation: WBVar00151833
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WBVar00151833 | Name | Public_name | WBVar00151833 | ||
---|---|---|---|---|---|
Other_name | haw5083 | ||||
haw115970 | |||||
cewivar00164409 | |||||
Y54E10A.9c.2:c.*1039T>C | |||||
Y54E10A.9b.1:c.*1039T>C | |||||
Y54E10A.9a.1:c.*1039T>C | |||||
Y54E10A.9c.1:c.*1039T>C | |||||
HGVSg | CHROMOSOME_I:g.3158725A>G | ||||
Sequence_details | SMap | S_parent | Sequence | K09H9 | |
Flanking_sequences | gcagttggttggggagaaattggca | atagaaattgaagagaaagcgtgga | |||
Mapping_target | K09H9 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00535835 | |||
WBVar01341944 | |||||
Status | Live | ||||
Affects | Gene | WBGene00006888 | |||
Transcript | Y54E10A.9c.1 | VEP_consequence | 3_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y54E10A.9c.1:c.*1039T>C | ||||
cDNA_position | 3232 | ||||
Exon_number | 10/10 | ||||
Y54E10A.9a.1 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y54E10A.9a.1:c.*1039T>C | ||||
cDNA_position | 3073 | ||||
Exon_number | 10/10 | ||||
Y54E10A.9c.2 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y54E10A.9c.2:c.*1039T>C | ||||
cDNA_position | 3057 | ||||
Exon_number | 9/9 | ||||
Y54E10A.9b.1 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y54E10A.9b.1:c.*1039T>C | ||||
cDNA_position | 3082 | ||||
Exon_number | 10/10 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw5083 | ||||
Method | WGS_Hawaiian_Waterston |